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Converting binary data into useful values

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Points 10

Christoph Metzke posted on Mon, May 5 2014 5:06 PM

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For a project at my university I have to read in data files from an AFM diode measurement into DIAdem. I have to use binary files with raw data. I am not allowed to use ascii files or files with calculated values. How can I convert the binary data into usefull values? Unfortunately I can't upload such a file, so I just copied one file here.

\*Force file list

\Version: 0x04440102

\Date: 12:45:11 PM Tue Mar 29 2005

\Start context: FOL2

\Data length: 20480

\Text:

\History:

\Navigator note:

\*Equipment list

\Description: TUNA D3100

\Controller: IIIA

\Microscope: D3100

\Extender: Basic

\Sensor: TUNA

\Tip Exchange: None

\SECS: None

\Robot: None

\Vision: Frame Grabber

\Zoom System: Motorized

\Air Table: None

\Scanner file: 1613gn.scn

\Profile name: contact

\*Scanner list

\Scanner type: Dimension

\Serial number: 1613g

\Piezo size: G

\File name: 1613gn.scn

\Retracted offset der: 2.2

\Extended offset der: 7.98

\Allow rotation: Allow

\Piezo cal: 440

\X sensitivity: 155.324

\X derate: 0.2154

\X mag: 1.3

\X mag1: 0.8

\X arg: 3.4

\X round: 0

\Orthogonality: -0.00872665

\Y sensitivity: 146.908

\Y derate: 0.3168

\Y mag: 1.1

\Y mag1: 1

\Y arg: 3.5

\X slow sensitivity: 167.248

\X slow derate: 0.290158

\Y fast sensitivity: 153.984

\Y fast derate: 0.227309

\X slow-fast coupling: 0.524718

\X slow-fast coupling derating: 0.000116998

\Y slow-fast coupling: 0.512811

\Y slow-fast coupling derating: 3.1906e-005

\Fast cal freq: 2.44141

\Slow cal freq: 4.76838

\Xs-Yf coupling: 0.0844055

\Xs-Yf coupling derating: -6.59962e-006

\Ys-Xf coupling: 0.16088

\Ys-Xf coupling derating: 0.000152096

\X offset sens: 280

\Y offset sens: 280

\@Sens. Zscan: V 12.74000 nm/V

\@Sens. Current: V 10.00000 nA/V

\*Ciao scan list

\Parameter select: Main

\Operating mode: Force

\Tip serial number:

\Scan size: 0 nm

\X offset: -300 nm

\Y offset: -600 nm

\Rotate Ang.: 0

\Samps/line: 256

\Lines: 256

\Y disable: Enabled

\Aspect ratio: 1:1

\Bidirectional scan: Disabled

\Scan line shift: 0

\Scan rate: 0.500288

\Tip velocity: 0

\Minimum scan rate: 0.1

\Lift rate: 4

\X drift: 0

\Y drift: 0

\Step XY size: 300

\Cycles: 10

\Step XY period: 0.005

\Step size: 3

\Units: Metric

\Color table: 12

\Scope dualtrace: Dual

\Auto X Sep: 0

\Auto Y Sep: 0

\Auto pattern: Linear

\Auto number: 2

\Capture direction: Down

\Capture prelines: 50

\Engage Setpoint: 1

\Min int. gain: 3

\Drive feedback: Disabled

\Drive time: 0

\Drive setpoint: 1

\Drive gain: 80

\Profiler profiling: Disabled

\Profiler length goal: 500

\Profiler length actual: 0.001

\Profiler speed: 1

\Profiler scan time: 0.001

\Profiler resolution: 0.001

\Profiler x position: 0

\Profiler y position: 0

\Profiler z position: 0

\Profiler profiler position: 0

\Profiler tilt angle: 0

\Profiler direction: Forward

\Profiler axis: Aux

\Profiler ramp-up ideal-distance multiplier: 25

\Profiler ramp-up total-distance minimum: 2

\Profiler ramp-up total-distance goal: 10

\Profiler backlash-removal distance: 10

\Profiler backlash-removal speed: 33

\Profiler num profile axis display points 3D: 512

\Gain start: 32

\Gain end: 440

\Gain incr: 32

\Pro. Gain factor: 1.5

\Max shift: 0.05

\Lines/gain: 3

\Gain offset: 0.9

\Auto Gain: Disabled

\Start size: 20000 nm

\Pass 2 size: 10000 nm

\Pass 3 size: 5000 nm

\Pass 4 size: 2000 nm

\Feature scan angle: 0

\Feature Scan rate: 1

\Feature step size: 0.138889

\Feature setpoint: 0.1

\Feature threshold: 2000

\Pass delay: 5

\Z offset: 0

\Z tolerance: 9102.09

\Engage X offset: 0 nm

\Engage Y offset: 0 nm

\Current Sens.: 1 pA/V

\Bias limit: 12 V

\MR Gain: 1000

\MSM low limit: 10

\MSM high limit: 150

\@InterleaveList: S [InterleaveOffMode] "Disabled"

\@LinearizeList: S [LinearizeOffMode] "modeLinearizeOff"

\@TUNAList: S [TUNAOffMode] "Open"

\@MicroscopeList: S [TUNAMode] "TUNA"

\@Capacitance feedback: S [] ""

\@4:SPMFeedbackList: S [SPMFb] "Deflection"

\@3:SPMFeedbackList: S [SPMFb] "Deflection" linked

\@2:Input feedback: S [] ""

\@3:Input feedback: S [] ""

\@2:Capacitance feedback: S [] ""

\@3:Capacitance feedback: S [] ""

\@Sens. DC test bias: V 1.000000 V/V

\@Sens. Deflection: V 169.5067 nm/V

\@Sens. MR bias: V 2.500000 mA/V

\@Sens. Current: V 1.000000 pA/V

\@Sens. Friction: V 1.000000

\@Sens. Amplitude: V 1.000000

\@Sens. MR sensitivity: V 1.000000

\@Sens. Phase: V 1.000000

\@Sens. Frequency: V 1.000000

\@Sens. Potential: V 1.000000

\@Sens. Thermal: V 1.000000

\@Sens. dC/dV: V 1.000000

\@Sens. Fdback bias: V 1.000000

\@Sens. In 0: V 1.000000

\@Sens. Resistance: V 1.000000

\@Sens. High Frequency: V 1.000000

\@Sample period: V (0.1000000 us/LSB) 16.00000 us

\@1:Z limit: V [Sens. Zscan] (0.006713867 V/LSB) 156.9859 V

\@1:DeflectionLimit: V (20.00000 V/LSB) 2.500000 V

\@1:FM igain: V (1.000000 1/LSB) 0

\@1:FM pgain: V (1.000000 1/LSB) 0

\@1:AmplitudeLimit: V (20.00000 V/LSB) 2.500000 V

\@Lift start height: V [Sens. Zscan] (0.002395380 V/LSB) 0 V

\@Lift scan height: V [Sens. Zscan] (0.002395380 V/LSB) 0 V

\@Drive height: V [Sens. Zscan] (0.002395380 V/LSB) 0 V

\@2:AFMSetDeflection: V (0.0003051758 V/LSB) 0.1012207 V

\@3:AFMSetDeflection: V (0.0003051758 V/LSB) 0 V linked

\@2:TMSetAmplitude: V (0.0003051758 V/LSB) 1.669739 V

\@3:TMSetAmplitude: V (0.0003051758 V/LSB) 0 V linked

\@2:TMSetDeflection: V (0.0003051758 V/LSB) 2.000000 V

\@3:TMSetDeflection: V (0.0003051758 V/LSB) 0 V linked

\@2:TMSetPhase: V (0.005493164 deg/LSB) 0 deg

\@3:TMSetPhase: V (0.005493164 deg/LSB) 0 deg

\@2:STMSetCurrent: V [Sens. Current] (0.0003051758 V/LSB) 10.00000 V

\@3:STMSetCurrent: V [Sens. Current] (0.0003051758 V/LSB) 10.00000 V linked

\@2:Drive frequency: V (0.0000058208 kHz/LSB) 54.74079 kHz

\@3:Drive frequency: V (0.0000058208 kHz/LSB) 69.50000 kHz linked

\@2:Drive phase: V (0.005493164 deg/LSB) -119.6027 deg

\@3:Drive phase: V (0.005493164 deg/LSB) 0 deg

\@2:Drive amplitude: V (0.6103516 mV/LSB) 263.8939 mV

\@3:Drive amplitude: V (0.6103516 mV/LSB) 503.6978 mV linked

\@2:Cap. feedback setpt: V (0.0003051758 V/LSB) 0 V

\@3:Cap. feedback setpt: V (0.0003051758 V/LSB) 0 V

\@2:Bias Frequency: V (0.0000058208 kHz/LSB) 0 kHz

\@3:Bias Frequency: V (0.0000058208 kHz/LSB) 0 kHz

\@2:AC bias ampl: V (0.0003051758 V/LSB) 0 V

\@3:AC bias ampl: V (0.0003051758 V/LSB) 0 V

\@2:DC bias: V (0.0003662109 V/LSB) 0 V

\@3:DC bias: V (0.0003662109 V/LSB) 0 V

\@2:Lock-in phase: V (0.005493164 deg/LSB) 90.00000 deg

\@3:Lock-in phase: V (0.005493164 deg/LSB) 90.00000 deg

\@2:Stray cap. adj.: V (0.0003051758 V/LSB) 0 V

\@3:Stray cap. adj.: V (0.0003051758 V/LSB) 0 V

\@2:Cap. Sensor Freq.: V (0.0003051758 V/LSB) 0 V

\@3:Cap. Sensor Freq.: V (0.0003051758 V/LSB) 0 V

\@2:Bias: V (0.3051758 mV/LSB) 200.0000 mV

\@3:Bias: V (0.3051758 mV/LSB) 200.0000 mV linked

\@2:Analog 1: V (0.0003051758 V/LSB) 0 V

\@3:Analog 1: V (0.0003051758 V/LSB) 0 V linked

\@2:Analog 2: V (0.0003662109 V/LSB) 0 V

\@3:Analog 2: V (0.0003662109 V/LSB) 0 V linked

\@2:DC Sample bias: V (0.0003662109 V/LSB) 0 V

\@3:DC Sample bias: V (0.0003662109 V/LSB) 0 V

\@2:DC test bias: V [Sens. DC test bias] (0.0003051758 V/LSB) 0 V

\@3:DC test bias: V [Sens. DC test bias] (0.0003051758 V/LSB) 0 V

\@2:cnZmod: V (0.0000152588 1/LSB) 0

\@3:cnZmod: V (0.0000152588 1/LSB) 0 linked

\@2:SPMFbIgain: V (0.03125000 1/LSB) 1.280974

\@3:SPMFbIgain: V (0.03125000 1/LSB) 0.4000000 linked

\@2:SPMFbPgain: V (0.03125000 1/LSB) 2.257546

\@3:SPMFbPgain: V (0.03125000 1/LSB) 0.6000000 linked

\@2:SPMFbSgain: V (0.0000305176 1/LSB) 0

\@3:SPMFbSgain: V (0.0000305176 1/LSB) 0 linked

\@2:Tip Drive phase: V (0.005493164 deg/LSB) 0 deg

\@3:Tip Drive phase: V (0.005493164 deg/LSB) 0 deg

\@2:MSM Lock-in phase: V (0.005493164 deg/LSB) 90.00000 deg

\@3:MSM Lock-in phase: V (0.005493164 deg/LSB) 90.00000 deg

\@2:MR bias: V [Sens. MR bias] (0.0003051758 V/LSB) 0 V

\@3:MR bias: V [Sens. MR bias] (0.0003051758 V/LSB) 0 V

\@DC sample bias: V (0.0003662109 V/LSB) 0 V

\@Current setpoint: V [Sens. Current] (0.0003051758 V/LSB) 0 V

\@Bias lower limit: V (0.0003662109 V/LSB) 0 V

\@Bias upper limit: V (0.0003662109 V/LSB) 0 V

\@Feedback gain: V (0.03125000 1/LSB) 0

\@Cap correction: V (2.000000 1/LSB) 0

\@DC test bias: V [Sens. DC test bias] (0.0003051758 V/LSB) 0 V

\*Ciao force list

\Scan rate: 0.300019

\Forward vel.: 4.20027

\Reverse vel.: 4.20027

\Samps/line: 128 128

\Ave lines: 1

\Display mode: Both

\Trigger mode: Off

\Trig slope: Negative

\Plot start: 0

\Plot end: 1

\Auto start: Enable

\Auto offset: Off

\Start mode: Step

\End mode: Retracted

\Ramp delay: 0

\Reverse delay: 0

\Indent setpoint: 0.5

\X Rotate: 18

\Scratch length: 100 nm

\Scratch rate: 1

\Scratch angle: 0

\Size linked: Off

\Lift height: 100

\Columns: 5

\Rows: 5

\Column step: 300

\Row step: 300

\Capture: Enabled

\Volume offset: 0

\force/line: 16 0

\Samples / line: 16 0

\Z direction: Retract

\Center plot: Off

\FV scan rate: 0.178934

\Tip factor: 0

\True resonance: 0

\Tip type: 100W

\Feedback type: None

\Feedback counts: 0

\@Z scan start: V [Sens. Zscan] (0.006713867 V/LSB) 69.33807 V

\@Z scan size: V [Sens. Zscan] (0.006713867 V/LSB) 0 V

\@Z step size: V [Sens. Zscan] (0.006713867 V/LSB) 0 V

\@Sample period: V (0.1000000 us/LSB) 35.00000 us

\@4:Image Data: S [ImageOff] "Off"

\@4:Trig threshold Off: V (1.000000 1/LSB) 0

\@4:Threshold step Off: V (1.000000 1/LSB) 0

\@4:Ramp channel: S [TUNABias] "DC Sample bias"

\@4:Ramp size DC Sample bias: V (0.0003662109 V/LSB) 7.000000 V

\@4:Ramp offset DC Sample bias: V (0.0003662109 V/LSB) 0 V

\@4:Ramp Begin DC Sample bias: V (0.0003662109 V/LSB) 0 V

\@4:Ramp End DC Sample bias: V (0.0003662109 V/LSB) -7.000000 V

\@4:Feedback value DC Sample bias: V (0.0003662109 V/LSB) 0 V

\@4:Z display DC Sample bias: V (0.0003662109 V/LSB) 0 V

\*Ciao force image list

\Data offset: 20480

\Data length: 512

\Bytes/pixel: 2

\Start context: ROL

\Data type: FORCE

\Do zoffder: 0

\Note:

\Plane fit: 0 0 0 0

\Frame direction: Up

\Stage X: 0

\Stage Y: 0

\Stage type: N/A

\Profile length: 0

\Profile speed [um/s]: 0

\Samps/line: 128 128

\Scan line: Main

\Realtime planefit: Line

\Offline planefit: Full

\Z direction: Retract

\Force display mode: Normal

\Spring constant: 0.3

\Separation Scale: 0

\Force offset: 0

\Z magnew force: 1

\Scope coupling: DC

\Smoothing filter: 0

\Graph function: i

\STS I range: 15000

\STS DLI/DLV range: 10

\STS DLI/DV range: 10

\STS DI/DV range: 10

\STS Log(i) range: 10

\@4:Image Data: S [Deflection] "Deflection"

\@Z magnify: C [4:Z scale] 1.000000

\@4:Z scale: V [Sens. Deflection] (0.0000381470 V/LSB) 2.500000 V

\@4:Z offset: V [Sens. Deflection] (0.0000381470 V/LSB) 0 V

\@4:FV scale: V [Sens. Deflection] (0.0000381470 V/LSB) 2.500000 V

\@4:Volume offset: V [Sens. Deflection] (0.0000381470 V/LSB) 0 V

\@4:Ramp channel: S [TUNABias] "DC Sample bias"

\@Z scan size: V [Sens. Zscan] (0.006713867 V/LSB) 0 V

\@4:Ramp size: V (0.0003662109 V/LSB) 7.000000 V

\@4:Ramp offset: V (0.0003662109 V/LSB) 0 V

\@4:Ramp Begin: V (0.0003662109 V/LSB) 0 V

\@4:Ramp End: V (0.0003662109 V/LSB) -7.000000 V

\@4:Z display: V (0.0003662109 V/LSB) 0 V

\*Ciao force image list

\Data offset: 20992

\Data length: 512

\Bytes/pixel: 2

\Start context: ROL

\Data type: FORCE

\Do zoffder: 0

\Note:

\Plane fit: 0 0 0 0

\Frame direction: Up

\Stage X: 0

\Stage Y: 0

\Stage type: N/A

\Profile length: 0

\Profile speed [um/s]: 0

\Samps/line: 128 128

\Scan line: Main

\Realtime planefit: Line

\Offline planefit: Full

\Z direction: Retract

\Force display mode: Normal

\Spring constant: 0.3

\Separation Scale: 0

\Force offset: 0

\Z magnew force: 1

\Scope coupling: DC

\Smoothing filter: 0

\Graph function: i

\STS I range: 15000

\STS DLI/DLV range: 10

\STS DLI/DV range: 10

\STS DI/DV range: 10

\STS Log(i) range: 10

\@4:Image Data: S [TUNAInOff] "Current"

\@Z magnify: C [4:Z scale] 1.000000

\@4:Z scale: V [Sens. Current] (0.0003051758 V/LSB) 20.00000 V

\@4:Z offset: V [Sens. Current] (0.0003051758 V/LSB) 0 V

\@4:FV scale: V [Sens. Current] (0.0003051758 V/LSB) 20.00000 V

\@4:Volume offset: V [Sens. Current] (0.0003051758 V/LSB) 0 V

\@4:Ramp channel: S [TUNABias] "DC Sample bias"

\@Z scan size: V [Sens. Zscan] (0.006713867 V/LSB) 0 V

\@4:Ramp size: V (0.0003662109 V/LSB) 7.000000 V

\@4:Ramp offset: V (0.0003662109 V/LSB) 0 V

\@4:Ramp Begin: V (0.0003662109 V/LSB) 0 V

\@4:Ramp End: V (0.0003662109 V/LSB) -7.000000 V

\@4:Z display: V (0.0003662109 V/LSB) 0 V

\*File list end

×ùžùÇù®ùÆùßùæù úú7úBúóù$úúùùúøùúúdú\úHú6úãùú`ú+ú'ú(úCúGú4ú)ú'úÿùéùúùýùËùÔùÅùÐùêùú*ú0ú7ú>úúúùéùìùúú6úOúæùÒùúúÿùúúúiúDúGú€ú(úúúÕùËùú®ù®ù±ùÜùÊù£ù›ùàù”ù²ùÄùÉùÃù{ùqùOùZùeùlùSù+ù1ùùìøùùùùDùQùùìøËøÞø’øŸøžø¼ø»øÖø¤øûøÝø©ø«øŒøÄøøûøŽøiø‡ø’ø.øã÷"ø(øø2øß÷ÿ÷ë÷ø=øMøiø˜økøBø:øløUø‚øUø5ø3øøøö÷ø:øøø÷è÷ï÷È÷é÷ä÷ë÷ö÷Á÷Â÷øøæ÷´÷Ó÷ê÷!ø2øø4øò÷î÷ö÷"øî÷Ç÷ö÷½÷ª÷Ö÷ü÷Ü÷Pø<øøÀ÷Ô÷øó÷É÷û÷?øøøò÷¾÷ñ÷"øø;øü÷ç÷ó÷ê÷Ø÷ü÷¼÷õ÷÷ øøø)ø6øøº÷™÷½÷ øøjøsørøø÷Uøøøøøî÷ò÷øó÷ý÷Ñ÷ö÷ë÷ß÷¾÷øä÷ý÷¹÷Ù÷ö÷Þ÷Ü÷Ç÷ð÷ð÷(í¤áÏàýàáá7àCá5á ááÿà±áá:áõà-â÷ßuàááˆà½àÒàájáºàààƒá¯à8ááÙáàüà2áhàbáMáÈáÖàà‘à„àÖßàKàîàápàgàÉàËáFá!á´á^áåàáâáÅà¶àIàÝà•àýß½ààŒà¹àfá±àá2ànàáàœàà^àùßàÐßOßóÞ5ÞÝûÜ<ÚiÔÐÆ¦¶ÍYã¥-€(€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€ýýhÎ€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€€

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Converting binary data into useful values

rated by 0 users This post has 0 verified answers | 0 Replies | 1 Follower

rated by 0 users
This post has 0 verified answers | 0 Replies | 1 Follower